PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37573.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 191aa    MW: 21300.8 Da    PI: 8.2331
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37573.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.8e-11249454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  KHN37573.1  2 SHIAVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                89************************9...9******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.84E-15168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.94E-11154No hitNo description
PROSITE profilePS5088814.589149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-8249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-11261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-9455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2607.1E-4115178No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MSHIAVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GVIEFIKELH QVRQALESQK  60
RRKSLSPSPG PSPRTLQPTF HQLDSSSMIG TNSFKELGAS CNSPVADVEV KISGSNVILK  120
VICHRIPGQV AKIITVLESL SFEVLHLNIS SMEETVLYQF VVKIELGCQL SLEELAMEVQ  180
QSFCSDAIIA L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150381e-158AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003541630.11e-138PREDICTED: transcription factor MUTE-like
SwissprotQ9M8K61e-87MUTE_ARATH; Transcription factor MUTE
TrEMBLA0A0B2RYR91e-138A0A0B2RYR9_GLYSO; Transcription factor MUTE
TrEMBLI1M1421e-138I1M142_SOYBN; Uncharacterized protein
STRINGGLYMA13G27880.11e-137(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112523036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.19e-89bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]